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Publications Enabled by the CIPRES Science Gateway (2010-2013) and CIPRES Portal (2007-2009)

[2012; 229 articles] [2011; 143 articles] [2010; 92 articles] [2009; 60 articles] [2008; 4 articles]

In addition to the articles listed here, our users report 31 submitted/pending publications, and at least 125 in preparation. 

In Press (36 articles)

  1. Almeida, A.O., M. Terossi, C.L. Araújo-Silva & F.L. Mantelatto. (2013) Description of Alpheus buckupi spec. nov., a new amphi-Atlantic snapping shrimp (Caridea: Alpheidae), based on morphological and molecular data. Zootaxa. in press.
  2. DePriest MS, Lopez-Bautista JM. (2013) Sequencing of the rbcL marker reveals the non-native species Grateloupia taiwanensis (Halymeniaceae, Rhodophyta) in Alabama. Gulf of Mexico Science, in press.
  3. Vizzini A., Simonini G., Ercole E., Voyron S. (2013). Boletus mendax, a new species of Boletus sect. Luridi from Italy and insights on the B. luridus complex. Mycological Progress in press.  
  4. Locke M.M. and Skevington J.H. (2013). Revision of Nearctic Dasysyrphus Enderlein (Diptera: Syrphidae). Zootaxa. in press.
  5. (2013) Habitat and Host Indicate Lineage Identity in Colletotrichum gloeosporioides s.l. from Wild and Agricultural Landscapes in North America. PLoS ONE in press.
  6. Hemery LG, Roux M, Améziane N, Eléaume M (2013) High-resolution crinoid phyletic inter-relationships derived from molecular data. Proceedings of the 14th International Echinoderm Conference, Cahiers de Biologie Marine in press.
  7. Huddleston, J. R., Brokaw, J. M., Zak, J. C., Strauss, R. E., and Jeter, R. M.  (2013) Natural transformation as a mechanism of horizontal gene transfer among environmental Aeromonas species.  Systematic and Applied Microbiology in press.
  8. Brock AP, Cortés-Hinojosa G, Plummer CE, Conway JA, Roff SR, Childress AL, Wellehan JFX. (2013) A novel gammaherpesvirus in a large flying fox (Pteropus vampyrus) with blepharitis. Journal of Veterinary Diagnostic Investigation In press.
  9. Koga, R.K., Bennett, G.M., Cryan, J.R., & Moran N.A. (2013) Evolutionary replacement of obligate symbionts in an ancient and diverse insect lineage. Environmental Microbiology. In press.
  10. Bennett, G.M., and O’Grady, P.M. (2013) Historical biogeography and ecological opportunity in the adaptive radiation of native Hawaiian leafhoppers (Cicadellidae: Nesophrosyne). Journal of Biogeography.  In press.   
  11. Lahr, Daniel J. G. ; Grant, J. ; Katz, Laura A. (2013) Multigene Phylogenetic Reconstruction of the Tubulinea (Amoebozoa) Corroborates Four of the Six Major Lineages, while Additionally Revealing that Shell Composition Does not Predict Phylogeny in the Arcellinida. Protist (Jena. Print) ,http://dx.doi.org/10.1016/j.protis.2013.02.003
  12. Lapoint, R.T., P.M. O'Grady & N.K. Whiteman. (2013) Diversification and dispersal of the Hawaiian Drosophilidae: the evolution of Scaptomyza in press.
  13. Le Péchon et al. (2013) Dombeya formosa (Malvaceae s. l.): A New Species Endemic to La Réunion (Indian Ocean) Based on Morphological and Molecular Evidence. Systematic Botany in press.
  14. Leavitt, S.D., F. Fernández-Mendoza, M. Sohrabi, P.K. Divakar, J. Vondrak, H.T. Lumbsch & L. L. St. Clair. (2013) Local representation of global diversity in a morphologically cryptic lichen-forming fungal species-complex with a cosmopolitan distribution (Rhizoplaca, Ascomycota). Journal of Biogeography in press.
  15. Sohrabi, M., S.D. Leavitt, V.C. Rico, M. G. Halici, H. Sipman & G. Shresthra. (2013) Teuvoa, a new genus in the lichen-forming fungal genus Megasporaceae (Ascomycota: Pertusariales), including Teuvoa junipericola sp. nov. The Lichenologist in press.   
  16. Leavitt, S.D., M.P. Nelsen, H.T. Lumbsch and T.L. Esslinger (2013 )Further species diversity in neotropical Oropogon (Parmeliaceae: Ascomycota) in Central America. The Lichenologist in press.   
  17. Nazaire, M. and L. Hufford. (2013) Ambiguous phylogenetic relationships and discordant genetic patterns in three members of the genus Picris subsection Hieracioides affected by recurrent hybridization. Phylogenetic systematics of the genus Mertensia (Boraginaceae). Systematic Botany. in press.
  18. Noonan, B.P., J.B. Pramuk, R.L Bezy, E. Sinclair, K. de Queiroz, J.W. Sites Jr. (2013) Phylogenetic relationships within the lizard clade Xantusiidae: Using trees and divergence times to address evolutionary questions at multiple levels. Molecular Phylogenetics and Evolution in press.
  19. Hartikainen et al. (2013) Zoological Journal of the Linnean Society in press.
  20. Orange, A. (2013) Four new species of Verrucaria (Verrucariaceae, lichenised Ascomycota) from freshwater habitats in Europe. Lichenologist 45 in press.
  21. Otálora M. A. G. and Wedin M. (2013) Collema fasciculare belongs in Arctomia. The Lichenologist in press.
  22. Pimentel, M; Sahuquillo, E; Torrecilla, Z; Popp, M; Catalán, P and Brochmann C. (2013) Hybridizations and long-distance colonizations at different time scales: towards resolution of long-term controversies in the sweet vernal grasses (Anthoxanthum L.). Annals of Botany in press.
  23. Pinho et al. (2013) Tropical Plant Pathology 38: 137-142. (In press)
  24. Plume, O., S.C.K. Straub, N. Tel-Zur, A. Cisneros, B. Schneider, and J.J. Doyle. (2013) Testing a Hypothesis of Intergeneric Allopolyploidy in Vine Cacti (Cactaceae: Hylocereeae). Systematic Botany. in press.
  25. Prieto, M. and Wedin, M. (2013) Phylogenetic relationships of lichenized and non-lichenized calicioid fungi and the evolution of the mazaedium within Ascomycota. Cladistics. in press.
  26. Rodriguez et al. (accepted). Genetic diversity, phylogeny and evolution of alkaloid sequestering in Cuban miniaturized frogs of the Eleutherodactylus limbatus group. Molecular Phylogenetic and Evolution. in press.
  27. Salazar-Bravo, J., U. Pardiñas and G. D’Elía. (2013) A phylogenetic appraisal of Sigmodontinae (Rodentia, Cricetidae) with emphasis on phyllotine genera: systematics and biogeography. Zoologica Scripta xx:xx-xx. in press.
  28. Schmidt-Lebuhn A.N. and Constable L, (2013) Phylogenetic relationships of the Australasian shrubby everlastings Ozothamnus and Cassinia (Asteraceae: Asteroideae: Gnaphalieae). Cladistics. DOI: 10.1111/cla.12007. in press.
  29. Schwarze, K. and Burmester, T. (2013) Conservation of globin genes in the living fossil Latimeria chalumnae and reconstruction of the evolution of the vertebrate globin family. Biochim. Biophys. Acta in press.
  30. Strittmatter M, Gachon CMM, Müller DG, Kleinteich J, Heesch S, Tsirigoti A, Katsaros C, Kostopoulou M, and Küpper FC. (2013) New records of intracellular eukaryotic pathogens challenging brown macroalgae in the East Mediterranean Sea, with emphasis on LSU rRNA data of the oomycete pathogen Eurychasma dicksonii. Diseases of Aquatic Organisms in press.
  31. Urban, L. and Bailey, C.D. (2013)  Phylogeny of Leavenworthia and Selenia (Brassicaceae).  Systematic Botany in press.
  32. Vinogradov SN, Tinajero-Trejo M, Poole RK and Hoogewijs D (2013) Bacterial and Archaeal Globins – a Revised Perspective. Bioc him. Biophys. Acta in press.
  33. Water, M., A. M. M. Tiley, E. M. Kramer, A. W. Meerow, J. A. Langdale, and R. W. Scotland. (2013) The corona of the daffodil Narcissus bulbocodium shares stamen-like identity and is distinct from the orthodox floral whorls. Plant Journal, in press.
  34. Anderson MD, Ruess RW and Taylor DL. in press. Phylogeny and assemblage composition of Frankia in Alnus tenuifolia nodules across a primary successional sere in interior Alaska. Molecular Ecology in press.
  35. Zhang, G., Weirauch, C. (2013) Molecular phylogeny of Harpactorini (Insecta: Reduviidae): correlation of novel predation strategy with accelerated evolution of predatory leg morphology. Cladistics, in press.
  36. Araujo, L. A., Guimaraes, L. A., Sousa, T. S., Pessoa, O. D. L., Lotufo, T. M. C., Costa-Lotufo, L.. (2013) Cytotoxicity of Actinomycetes associated with the Brazilian Endemic Tunicate Eudistoma vannamei Millar, 1977. Latin American Journal of Aquatic Research, in press.

 

2013 (78 articles)

  1. Zhao, Y., Qi, Z., Ma, W., et al. (2013) Comparative phylogeography of the Smilax hispida group (Smilacaceae) in eastern Asia and North America - implications for allopatric speciation, causes of diversity disparity, and origins of temperate elements in Mexico. Molecular Phylogenetics and Evolution http://dx.doi.org/10.1016/j.ympev.2013.03.025.
  2. Hoffmann, M. H., Schneider, J., Hase, P., and Röser, M. (2013) Rapid and Recent World-Wide Diversification of Bluegrasses (<italic>Poa</italic>, Poaceae) and Related Genera. PLoS ONE 8, e60061.
  3. Medardi, G., Lantieri, A., Pfister, D. H., LoBuglio, K. F., and Cacialli, G. (2013) Clarification of Peziza fimeti with notes on P. varia collections on dung. Mycotaxon 121, 465-476
  4. Pinho, D. B., Firmino, A. L., Ferreira-Junior, W. G., and Pereira, O. L. (2013) An efficient protocol for DNA extraction from Meliolales and the description of Meliola centellae sp. nov. Mycotaxon 122, 333-345.
  5. Stiller, J., Rousset, V., Pleijel, F., Chevaldonné, P., Vrijenhoek, R. C., and Rouse, G. W. (2013) Phylogeny, biogeography and systematics of hydrothermal vent and methane seep Amphisamytha (Ampharetidae, Annelida), with descriptions of three new species. Systematics and Biodiversity 11, 35-65.
  6. Souza Leite, T., Cnossen-Fassoni, A., Pereira, O., Mizubuti, E., Araújo, E., Queiroz, M. (2013) Novel and highly diverse fungal endophytes in soybean revealed by the consortium of two different techniques. J Microbiol. 51, 56-69.
  7. Arthaud, I. D. B., Rodrigues, F. A. R., Jimenez, P. C., Montenegro, R. C., Angelim, A. L., Maciel, V. M. M., Silveira, E. R., Freitas, H. P. S., Sousa, T. S., Pessoa, O. D. L., Lotufo, T. M. C., and Costa-Lotufo, L. V. (2012) Studies on the Secondary Metabolites of a Pseudoalteromonas sp. Isolated from Sediments Collected at the Northeastern Coast of Brazil. Chemistry & Biodiversity 9, 418-427.
  8. Barker, F. K., Burns, K. J., Klicka, J., Lanyon, S. M., and Lovette, I. J. (2013) Going to Extremes: Contrasting Rates of Diversification in a Recent Radiation of New World Passerine Birds. Systematic Biology 62, 298-320.
  9. Aze, A., Hudson, C., Yasuo, H., Torrejon, M., Escriva, H., and Marcellini, S. (2013) A dynamic history of gene duplications and losses characterizes the evolution of the SPARC family in eumetazoans. Proceedings of the Royal Society B: Biological Sciences 280
  10. Ohm, R. A., Feau, N., Henrissat, B., Schoch, C. L., Horwitz, B. A., Barry, K. W., Condon, B. J., Copeland, A. C., Dhillon, B., Glaser, F., Hesse, C. N., Kosti, I., LaButti, K., Lindquist, E. A., Lucas, S., Salamov, A. A., Bradshaw, R. E., Ciuffetti, L., Hamelin, R. C., Kema, G. H. J., Lawrence, C., Scott, J. A., Spatafora, J. W., Turgeon, B. G., de Wit, P. J. G. M., Zhong, S., Goodwin, S. B., and Grigoriev, I. V. (2012) Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi. PLoS Pathog 8, e1003037.
  11. Garzón, L. N., Oliveros, O. A., Rosen, B., Ligarreto, G. A., Cook, D. R., and Blair, M. W. (2013) Isolation and Characterization of Nucleotide-Binding Site Resistance Gene Homologues in Common Bean (Phaseolus vulgaris). Phytopathology 103, 156-168.
  12. Varshney, R. K., Song, C., Saxena, R. K., Azam, S., Yu, S., Sharpe, A. G., Cannon, S., Baek, J., Rosen, B. D., Tar'an, B., Millan, T., Zhang, X., Ramsay, L. D., Iwata, A., Wang, Y., Nelson, W., Farmer, A. D., Gaur, P. M., Soderlund, C., Penmetsa, R. V., Xu, C., Bharti, A. K., He, W., Winter, P., Zhao, S., Hane, J. K., Carrasquilla-Garcia, N., Condie, J. A., Upadhyaya, H. D., Luo, M.-C., Thudi, M., Gowda, C. L. L., Singh, N. P., Lichtenzveig, J., Gali, K. K., Rubio, J., Nadarajan, N., Dolezel, J., Bansal, K. C., Xu, X., Edwards, D., Zhang, G., Kahl, G., Gil, J., Singh, K. B., Datta, S. K., Jackson, S. A., Wang, J., and Cook, D. R. (2013) Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement. Nat Biotech 31, 240-246.
  13. Gibson, J. F., and Skevington, J. H. (2013) Phylogeny and taxonomic revision of all genera of Conopidae (Diptera) based on morphological data. Zoological Journal of the Linnean Society 167, 43-81.
  14. Gibson, J.F., Skevington, J.H. and Kelso, S. (2013). A phylogenetic analysis of relationships among genera of Conopidae (Diptera) based on molecular and morphological data. Cladistics. 1??: 1-34.
  15. Granados Mendoza, C., Wanke, S., Salomo, K., Goetghebeur, P., and Samain, M.-S. (2013) Application of the phylogenetic informativeness method to chloroplast markers: A test case of closely related species in tribe Hydrangeeae (Hydrangeaceae). . Molecular Phylogenetics and Evolution 66, 233-242.
  16. Lam, L., Garner, M. M., Miller, C. L., Milne, V. E., Cook, K. A., Riggs, G., Grillo, J. F., Childress, A. L., and Wellehan, J. F. X. (2013) A novel gammaherpesvirus found in oral squamous cell carcinomas in sun bears (Helarctos malayanus). Journal of Veterinary Diagnostic Investigation 25, 99-106.
  17. Ivanović, A., Üzüm, N., Wielstra, B., Olgun, K., Litvinchuk, S. N., Kalezić, M. L., and Arntzen, J. W. (2013) Is mitochondrial DNA divergence of Near Eastern crested newts (Triturus karelinii group) reflected by differentiation of skull shape? Zoologischer Anzeiger - A Journal of Comparative Zoology 252, 269-277.
  18. Krenek, S., Schlegel, M., and Berendonk, T. (2013) Convergent evolution of heat-inducibility during subfunctionalization of the Hsp70 gene family. BMC Evolutionary Biology 13, 49.
  19. Leavitt, S.D., T.L. Esslinger, T. Spribille, P.K. Divakar & H. T. Lumbsch (2013) Multilocus phylogeny of the lichen-forming fungal genus Melanohalea (Parmeliaceae, Ascomycota): Insights on diversity, distributions, and a comparison of species tree and concatenated topologies. Molecular Phylogenetics and Evolution 66(1): 138–152.
  20. Toome, M., Roberson, R. W., and Aime, M. C. (2013) Meredithblackwellia eburnea gen. et sp. nov., Kriegeriaceae fam. nov. and Kriegeriales ord. nov.—toward resolving higher-level classification in Microbotryomycetes. Mycologia 105, 486-495.
  21. Garcia, S. L., McMahon, K. D., Martinez-Garcia, M., Srivastava, A., Sczyrba, A., Stepanauskas, R., Grossart, H.-P., Woyke, T., and Warnecke, F. (2013) Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton. ISME J 7, 137-147.
  22. Netto-Ferreira, A.L., Birindelli, J.L.O., Sousa,L.M., Mariguela, T.C., Oliveira, C. - A new miniature characid (Ostariophysi: Characiformes: Characidae), with phylogenetic position inferred from morphological and molecular data. PLoS ONE 8(1): 2013, e52098, doi:10.1371/journal.pone.0052098.
  23. Wilson, J., Dohlen, C., Forister, M., Pitts, J., 2013. Family-Level Divergences in the Stinging Wasps (Hymenoptera: Aculeata), with Correlations to Angiosperm Diversification. Evolutionary Biology 40, 101-107.
  24. von Dohlen, C. D., Spaulding, U., Shields, K., Havill, N. P., Rosa, C., and Hoover, K. (2013) Diversity of proteobacterial endosymbionts in hemlock woolly adelgid (Adelges tsugae) (Hemiptera: Adelgidae) from its native and introduced range. Environmental Microbiology, n/a-n/a.
  25. Rodríguez-Gómez, F., Gutiérrez-Rodríguez, C., and Ornelas, J. F. (2013) Genetic, phenotypic and ecological divergence with gene flow at the Isthmus of Tehuantepec: the case of the azure-crowned hummingbird (Amazilia cyanocephala). Journal of Biogeography, n/a-n/a.
  26. Parada, A., Pardiñas, U. F. J., Salazar-Bravo, J., D’Elía, G., and Palma, R. E. (2013) Dating an impressive Neotropical radiation: Molecular time estimates for the Sigmodontinae (Rodentia) provide insights into its historical biogeography. Molecular Phylogenetics and Evolution 66, 960-968.
  27. Shultz, A. J., and Burns, K. J. (2013) Plumage evolution in relation to light environment in a novel clade of Neotropical tanagers. Molecular Phylogenetics and Evolution 66, 112-12.
  28. Sullivan, J. P., Muriel-Cunha, J., and Lundberg, J. G. (2013) Phylogenetic relationships and molecular dating of the major groups of catfishes of the Neotropical superfamily Pimelodoidea (Teleostei, Siluriformes). . Proceedings of the Academy of Natural Sciences of Philadelphia 162, 89-110.
  29. Guschanski, K., Krause, J., Sawyer, S., Valente, L. M., Bailey, S., Finstermeier, K., Sabin, R., Gilissen, E., Sonet, G., Nagy, Z. T., Lenglet, G., Mayer, F., and Savolainen, V. (2013) Next-Generation Museomics Disentangles One of the Largest Primate Radiations. Systematic Biology.
  30. Alexander, P. J., Windham, M. D., Beck, J. B., Al-Shehbaz, I. A., Allphin, L., and Bailey, C. D. (2013) Molecular Phylogenetics and Taxonomy of the Genus Boechera and Related Genera (Brassicaceae: Boechereae). Systematic Botany 38, 192-209.
  31. Vizzini, A., Picillo, B., Ercole, E., Voyron, S., and Contu, M. Detecting the variability of Hydnum ovoideisporum (Agaricomycetes, Cantharellales) on the basis of Italian collections, and H. magnorufescens sp. nov.  
  32. Hobbs, C.R. and Baldwin, B.G. (2013) Asian origin and upslope migration of Hawaiian Artemisia (Compositae–Anthemideae). Journal of Biogeography 
  33. Kokošar, J. and Kordiš, D. (2013) Genesis and regulatory wiring of retroelement-derived domesticated genes: a phylogenomic perspective. Molecular Biology and Evolution 
  34. Batalha-Filho, H., Irestedt, M., Fjeldså, J., Ericson, P.G.P., Silveira, L.F., and Miyaki, C.Y. (2013) Molecular systematics and evolution of the Synallaxis ruficapilla complex (Aves: Furnariidae) in the Atlantic Forest. Molecular Phylogenetics and Evolution http://dx.doi.org/10.1016/j.ympev.2013.01.007
  35. Kits, J.H., Marshall, S.A., and Skevington, J.H. (2013) Phylogeny of the Archiborborinae (Diptera: Sphaeroceridae) Based on Combined Morphological and Molecular Analysis. PloS one 8, e51190.
  36. Sultana, T., Kim, J., Lee, S.H., et al. (2013) Comparative analysis of complete mitochondrial genome sequences confirms independent origins of plant-parasitic nematodes. BMC Evolutionary Biology 13, 12.
  37. Parfrey, L.W. and Lahr, D.J.G. (2013) Multicellularity arose several times in the evolution of eukaryotes (Response to DOI 10.1002/bies. 201100187). BioEssays 
  38. Velzen, R., Wahlberg, N., Sosef, M.S.M., and Bakker, F.T. (2013) Effects of changing climate on species diversification in tropical forest butterflies of the genus Cymothoe (Lepidoptera: Nymphalidae). Biological Journal of the Linnean Society 
  39. Lautredou, A.C., Motomura, H., Gallut, C., Ozouf-Costaz, C., Cruaud, C., Lecointre, G., and Dettai, A. New nuclear markers and exploration of the relationships among Serraniformes (Acanthomorpha, Teleostei): The importance of working at multiple scales. Molecular Phylogenetics and Evolution http://dx.doi.org/10.1016/j.ympev.2012.12.020
  40. Unmack, P.J., Allen, G.R., and Johnson, J.B. (2013) Phylogeny and biogeography of rainbowfishes (Melanotaeniidae) from Australia and New Guinea. Molecular Phylogenetics and Evolution 67, 15-27.DOI: http://dx.doi.org/10.1016/j.ympev.2012.12.019
  41. Vujić, A., Ståhls, G., Ačanski, J., Bartsch, H., Bygebjerg, R., and Stefanović, A. (2013) Systematics of Pipizini and taxonomy of European Pipiza Fallén: molecular and morphological evidence (Diptera, Syrphidae). Zoologica Scripta 
  42. Roelofs, D., Timmermans, M.J.T.N., Hensbergen, P., et al. (2012) A functional isopenicillin N synthase in an animal genome. Molecular Biology and Evolution 10.1093/molbev/mss269 http://mbe.oxfordjournals.org/content/early/2012/11/29/molbev.mss269.abstract
  43. Wu, L., Chen, R., Yi, Z., Li, J., Warren, A., and Lin, X. (2013) Morphology and Phylogeny of Three New Loxophyllum Species (Ciliophora, Pleurostomatida) from Mangrove Wetlands of Southern China. Journal of Eukaryotic Microbiology, n/a-n/a.DOI: 10.1111/jeu.12032
  44. Zelle, K.M., Lu, B., Pyfrom, S.C., and Ben-Shahar, Y. (2013) The Genetic Architecture of Degenerin/Epithelial Sodium Channels in Drosophila. G3: Genes|Genomes|Genetics 3, 441-450.DOI: 10.1534/g3.112.005272
  45. Bertrand, S., Fuentealba, J., Aze, A., et al. (2013) A dynamic history of gene duplications and losses characterizes the evolution of the SPARC family in Eumetazoans. Proceedings of the Royal Society B: Biological Sciences 28010.1098/rspb.2012.2963
  46. Metzgar, J.S., Alverson, E.R., Chen, S., Vaganov, A.V., and Ickert-Bond, S.M. Diversification and reticulation in the circumboreal fern genus Cryptogramma. Molecular Phylogenetics and Evolution http://dx.doi.org/10.1016/j.ympev.2013.02.020
  47. Schilling, E.E., Panero, J.L., Crozier, B.S., and Aranda, P.D. (2013) Relationships of Asanthus (Asteraceae, Eupatorieae). Systematic Botany 38, 253-258.DOI: 10.1600/036364413X661999
  48. Wu, Y., Wang, Y., and Hanken, J. (2012) {New species of Pachytriton (Caudata: Salamandridae) from the Nanling Mountain Range, southeastern China}. {ZOOTAXA} citeulike-article-id:11571653
  49. Hong-Wa, C. and Besnard, G. Intricate patterns of phylogenetic relationships in the olive family as inferred from multi-locus plastid and nuclear DNA sequence analyses: A close-up on Chionanthus and Noronhia (Oleaceae). Molecular Phylogenetics and Evolution http://dx.doi.org/10.1016/j.ympev.2013.02.003
  50. Heiniger, H., Cribb, T., and Adlard, R. (2013) Intra-specific variation of Kudoa spp. (Myxosporea: Multivalvulida) from apogonid fishes (Perciformes), including the description of two new species, K. cheilodipteri n. sp. and K. cookii n. sp., from Australian waters. Syst Parasitol 84, 193-215.DOI: 10.1007/s11230-012-9400-9
  51. Ertz, D., Fischer, E., Killmann, D., Razafindrahaja, T., and Sérusiaux, E. (2012) Savoronala, a new genus of Malmideaceae (Lecanorales) from Madagascar with stipes producing sporodochia. Mycological Progress, 1-12.DOI: 10.1007/s11557-012-0871-5
  52. Rush, T. and Aime, M.C. (2013) The genus Meira: phylogenetic placement and description of a new species. Antonie van Leeuwenhoek, 1-10.DOI: 10.1007/s10482-013-9889-1.
  53. Gates, K., Kerans, B., Keebaugh, J., Kalinowski, S., and Vu, N. (2013) Taxonomic identity of the endangered Snake River physa, Physa natricina (Pulmonata: Physidae) combining traditional and molecular techniques. Conservation Genetics 14, 159-169.DOI: 10.1007/s10592-012-0439-6
  54. O'Leary, M.A., Bloch, J.I., Flynn, J.J., et al. (2013) The Placental Mammal Ancestor and the Post–K-Pg Radiation of Placentals. Science 339, 662-667.DOI: 10.1126/science.1229237
  55. Cardoso, D., Paganucci de Queiroz, L., Cavalcante de Lima, H., Suganuma, E., van den Berg, C., and Lavin, M. (2013) A molecular phylogeny of the vataireoid legumes underscores floral evolvability that is general to many early-branching papilionoid lineages. American Journal of Botany 100, 403-421.DOI: 10.3732/ajb.1200276
  56. McMullen, A.R., Albayrak, H., May, F.J., Davis, C.T., Beasley, D.W.C., and Barrett, A.D.T. (2013) Molecular evolution of lineage 2 West Nile virus. J Gen Virol 94, 318-325.DOI: 10.1099/vir.0.046888-0
  57. Olsson, U., Irestedt, M., Sangster, G., Ericson, P.G.P., and Alström, P. (2013) Systematic revision of the avian family Cisticolidae based on a multi-locus phylogeny of all genera. Molecular Phylogenetics and Evolution 66, 790-799.DOI: http://dx.doi.org/10.1016/j.ympev.2012.11.004
  58. Hujslová, M., Kubátová, A., Kostovčík, M., and Kolařík, M. (2013) Acidiella bohemica gen. et sp. nov. and Acidomyces spp. (Teratosphaeriaceae), the indigenous inhabitants of extremely acidic soils in Europe. Fungal Diversity 58, 33-45.DOI: 10.1007/s13225-012-0176-7
  59. Ardila, N., Giribet, G., and Sanchez, J. (2012) A time-calibrated molecular phylogeny of the precious corals: reconciling discrepancies in the taxonomic classification and insights into their evolutionary history. BMC Evolutionary Biology 12, 246.
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